FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200499

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200499
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11136459
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG37250.019.8137557
CGGAGAT37150.019.6006169
TTGTGAG63450.019.3466176
GCTCGAC28150.018.8339376
TCGGAGA39050.018.6751028
GGCATCC45850.018.6643456
CCGCTAG37150.018.65315410
GACTCTC58550.018.5686361
CTTGTGA64050.018.5299745
AGCGATC45300.018.5276473
TGCGTCT32050.018.50062
CGTGTGC38500.018.4277135
GAGTAAT58850.018.41027610
GCGATCC44900.018.348734
GGAGTGC20550.018.1986665
GCCGATG42150.018.1441751
AGGTCGC32700.018.1306556
CGATCCA46200.018.0467785
GGGTAAG39150.018.0383663
CTGGACG17750.017.9783421
Produced by FastQC (version 0.11.5)