FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200501

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200501
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11120648
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG39750.020.2553527
TTGTGAG59650.019.712116
CGGAGAT41000.019.4231919
GCTCGAC27100.019.3198416
CGTGTGC37550.019.0693975
TCGGAGA42500.018.7376678
CTTGTGA62150.018.5652265
CACCGCT42350.018.544318
CCGCTAG41300.018.53638610
GGGTAAG35700.018.5175633
GGAGTGC22150.018.3735835
GAGTAAT57550.018.30990410
ACCGCTA42000.018.3060139
CCGGGTA31300.018.2823471
GACTCTC64200.018.2380961
TCTCGGA52200.018.2057726
CTATCGG35600.018.0445612
CTCGAGG27300.018.0184631
GGCATCC43750.018.0011756
AGGAGTG17450.017.9645064
Produced by FastQC (version 0.11.5)