FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200503

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200503
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12987529
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG42950.019.8729657
TTGTGAG70500.019.7993096
CGTGTGC47600.019.4341935
CGGAGAT43850.019.2142439
CTTGTGA73500.019.200695
GCTCGAC32900.018.9902176
TCGGAGA44900.018.7649148
GAGTAAT67250.018.61290210
GGCATCC54300.018.494756
GACTCTC69300.018.38591
GGGTAAG42850.018.3801783
CACCGCT43450.018.3025938
GGAGTGC26350.018.283995
CTATCGG41850.018.2693752
CGGTGGA24900.018.2001676
CCGCTAG43200.018.12843710
AGGTCGC36350.018.0653926
GCGATCC45600.017.9949844
GTTGAAC43400.017.9748841
CCGGGTA38800.017.9507081
Produced by FastQC (version 0.11.5)