FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12743919
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG44950.020.2123267
CGGAGAT45700.019.6880669
TTGTGAG69400.019.3201376
TCGGAGA46950.019.163898
GAGTAAT64800.018.70563910
CGGTGGA25350.018.6576296
GACTCTC71300.018.6426941
GGCATCC50900.018.6059286
CGTGTGC44200.018.5893555
CTTGTGA71000.018.5129435
GCTCGAC33950.018.46726
GGTGCCG20750.018.4470587
GCGATCC42300.018.1241824
CGGGCAC36150.018.0735784
GGAGTGC25150.018.0625065
GACGTTA50300.018.0037561
GACAATC50100.018.0030963
GCCGATG49500.017.9612871
TGCGTCT35050.017.9192242
CCGCTAG42450.017.87875710
Produced by FastQC (version 0.11.5)