FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12845926
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG45000.020.434387
CGGAGAT46350.019.5781639
TTGTGAG70050.019.345226
TCGGAGA46950.019.3045358
CGTGTGC45050.019.2643035
CTTGTGA72400.018.656535
CCGCTAG43100.018.63001810
GGTGCCG20600.018.5814557
GACTCTC70650.018.581261
CACCGCT44050.018.3780578
GGCATCC50450.018.3142536
GAGTAAT67650.018.25911110
GGGTAAG43150.018.1763573
CGGTGGA23600.018.1304556
GCTCGAC34150.018.037176
GCGATCC45250.018.0366734
CTCGAGG31300.017.929691
GTCGATT45350.017.9239968
ATCGGTA37700.017.9142284
CTATCGG43950.017.8719222
Produced by FastQC (version 0.11.5)