FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8413265
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG30900.020.5379187
CGGAGAT31600.019.7351429
TTGTGAG46900.019.470686
TCGGAGA32200.019.3674058
CTTGTGA46000.019.0623475
CGGTGGA16650.019.0306726
CCGCTAG28500.018.75591510
GGGTAAG27050.018.6283383
GACTCTC50150.018.6079651
GAGTAAT43650.018.59597410
CTATCGG25600.018.4804332
CGTGTGC31300.018.3485625
CACCGCT30250.018.2888688
GCGATCC29550.018.2809964
AGGTCGC24500.018.276976
TAACAAG32300.018.1156259
GACAATC33750.018.0597553
TCTCGGA40050.018.04846
AGCGATC30500.018.0362423
CCGGGTA24950.017.9513821
Produced by FastQC (version 0.11.5)