FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200513

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200513
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8336116
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGAGAT29650.019.7363439
CTCGGAG29800.019.6370017
TTGTGAG46050.019.5867066
TCGGAGA29950.019.538658
GGGTAAG28250.018.8453453
GAGTAAT43900.018.79226510
GCTCGAC23750.018.5719686
GGCATCC34650.018.5707656
GACTCTC46100.018.4997371
TGCGTCT21550.018.4262562
CCGGGTA24950.018.3920561
CCGCTAG28500.018.33289710
AGGTCGC26600.018.236196
AGCGATC32350.018.2250043
CGGTGGA15400.018.2136346
GCGATCC31850.018.2002934
CTTGTGA49400.018.1916585
CTGGACG13500.018.1775721
CGTGTGC27900.018.1355535
CGATCCA32800.018.0420385
Produced by FastQC (version 0.11.5)