FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200517

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200517
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8426857
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG29300.019.746687
TTGTGAG47000.019.4014956
CGGAGAT29450.019.384889
GAGTAAT43600.018.92162710
GACTCTC43950.018.8556461
TCGGAGA30400.018.8513588
CTTGTGA47250.018.8099695
CGTGTGC29650.018.808835
GCTCGAC20600.018.5819176
GGGTAAG29850.018.5722583
CTCGAGG21800.018.4264531
CGGTGGA16500.018.39946
CCGCTAG29200.018.15715610
CACCGCT29600.018.1345428
GGCATCC34100.018.128446
AAGGGCC17700.018.0842632
GCGATCC28100.018.0456734
GACAATC32500.018.0394123
CTGGACG14600.018.0156671
TCTCGGA37350.017.9646076
Produced by FastQC (version 0.11.5)