FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200523

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200523
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8263485
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG29450.020.0555137
CGGAGAT29750.019.8533929
TCGGAGA30650.019.2344198
TTGTGAG46750.018.9917726
GAGTAAT41800.018.65594910
GCTCGAC21550.018.634566
CCGCTAG27750.018.5097810
CGTGTGC28800.018.4513535
AGCGATC30100.018.4221463
CTTGTGA46550.018.364325
TGCGTCT24300.018.336972
CACCGCT28600.018.3056728
CCGGGTA26700.018.3015231
GGCATCC34150.018.299166
GGGTAAG29750.018.1950953
TCGTCGA24500.018.1870616
GACTCTC47200.018.1173461
CTGGACG14650.018.104851
GCGATCC30150.018.0995564
AGGTCGC26000.018.0687486
Produced by FastQC (version 0.11.5)