FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8965962
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG31800.020.6153967
TTGTGAG49900.019.7082586
CGGAGAT33050.019.6361129
TCGGAGA33250.019.5188
CGTGTGC31850.019.2032265
GAGTAAT47250.018.8099210
GACTCTC50450.018.4964711
GCTCGAC23200.018.4447566
CCGCTAG31150.018.43273710
CTTGTGA51850.018.3516985
GCGATCC32150.018.2028564
GGGTAAG29850.018.1681823
TGCGTCT26150.018.0886292
CTCGAGG22950.018.0764391
TCGTCGA28550.018.0708276
ACCGCTA31950.017.9710989
CGGTGGA16250.017.939236
TCTCGGA42150.017.9034966
CTGGACG15000.017.899991
AGCGATC33350.017.8447423
Produced by FastQC (version 0.11.5)