FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8842629
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGAGAT30400.020.0434469
CTCGGAG31000.019.9745967
TTGTGAG48600.019.199066
CGTGTGC31850.018.897135
TCGGAGA32200.018.8888478
CTTGTGA49300.018.8370765
CCGCTAG29750.018.7807510
GCTCGAC24400.018.714526
GACTCTC48750.018.4886781
GGCATCC35350.018.333546
AGCGATC31200.018.268093
TGCTCTA41150.018.2361225
CACCGCT31650.018.2093228
GAGTAAT45800.018.20287110
CGGTGGA15850.018.1883146
CTCGAGG22150.018.1349241
GCGATCC30650.018.093314
GGAGTGC17150.018.0926845
GACGAGC12950.018.0903119
TCGTCGA26750.018.0576486
Produced by FastQC (version 0.11.5)