FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11679685
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGAGAT41650.019.7789139
CTCGGAG42350.019.763477
TTGTGAG65850.019.2827036
TCGGAGA43000.019.1578678
GACTCTC63050.018.6572531
CTTGTGA67450.018.547975
CGTGTGC43050.018.4791935
TCGTCGA35700.018.4619056
CCGGGTA34400.018.4254931
CTGGACG19650.018.424191
GGTGCCG18150.018.4216657
GAGTAAT62600.018.37777910
CTCGAGG28700.018.3657511
CCGCTAG41500.018.3397610
GGGTAAG38750.018.2865623
GCCGATG43550.018.2433281
ATCGGTA36250.018.2121474
ACCGCTA41900.018.1646799
GCTCGAC31400.017.9765196
CACCGCT43150.017.9187748
Produced by FastQC (version 0.11.5)