FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10640997
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGTGAG56600.019.7480936
CGGAGAT33850.019.6923059
CTCGGAG33950.019.66677
GCTCGAC28250.019.5104456
TCGGAGA35100.018.9596738
GAGTAAT53700.018.90653810
CTTGTGA59450.018.7267445
GGCATCC42450.018.5559526
GGGTAAG31500.018.5094183
CCGCTAG35250.018.5046210
CGTGTGC36700.018.494935
CGGTGGA18250.018.446186
CGGGCAC29900.018.3962964
GACTCTC55050.018.348331
AGCTCGA18350.018.3450535
ACCGCTA35900.018.1082139
TCGTCGA33200.018.0926636
GCGATCC36300.018.0622224
GACGTTA43400.018.0510061
GGTGCCG18050.017.977427
Produced by FastQC (version 0.11.5)