FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10656338
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG36750.020.1436867
CGGAGAT36650.019.958739
TTGTGAG55050.019.6216436
CGTGTGC39700.019.14555
TCGGAGA38550.018.9749458
CTTGTGA55750.018.6648885
GCTCGAC29300.018.658216
CGGTGGA18650.018.6375776
GGGTAAG35400.018.3636633
GGAGTGC20750.018.2885885
CCGGGTA31900.018.2813851
GACTCTC58800.018.2640191
TCTCGGA46500.018.2618836
TCGTCGA34050.018.1874776
CCGCTAG34350.018.125310
ACCGCTA34300.018.1192269
CTGGACG18950.018.0582241
GCGATCC37150.017.9725234
GCCGATG43050.017.94271
GAGTAAT54200.017.92077810
Produced by FastQC (version 0.11.5)