FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200579

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200579
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10739750
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG38800.019.9014857
CGGAGAT39200.019.6422869
TCGGAGA39500.019.465268
TTGTGAG58850.019.1423056
CGGTGGA19300.019.0953796
CGTGTGC38550.019.0623595
GACTCTC59500.018.8282151
GCTCGAC27650.018.6602946
CCGCTAG35200.018.62454810
GAGTAAT55550.018.59360710
TAACAAG40150.018.465229
CTTGTGA61950.018.3968325
CCGGGTA32550.018.2566491
CGGGCAC32200.018.1409994
GGGTAAG37100.018.0580143
GCCGTGA18600.018.0453451
GGCATCC44400.018.0380336
TCGTCGA34000.018.0225836
GACGTTA43850.018.0191021
TGCGTCT31700.018.0110382
Produced by FastQC (version 0.11.5)