FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10404189
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG36400.019.7630467
CGGAGAT36600.019.35479
TTGTGAG59500.019.1152976
CTTGTGA58450.018.912765
CCGCTAG35100.018.8973210
CGTGTGC36150.018.6520045
GCTCGAC29500.018.6434156
GAGTAAT55750.018.58643510
GGCATCC40850.018.525676
TCGGAGA38300.018.4667198
GGGTAAG35350.018.3895633
GACAATC37850.018.2501773
GACTCTC55550.018.2418081
GGCGTAG12800.018.1320063
GCGATCC37250.018.1012064
GGAGTGC19450.018.0968785
GACGTTA42950.018.060021
CCGGGTA32450.018.004131
CGATCCA38350.017.9835555
AGCGATC38550.017.9758533
Produced by FastQC (version 0.11.5)