FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10510737
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG37050.019.8910487
CGGAGAT36100.019.8052049
TTGTGAG54750.019.4902116
TCGGAGA37200.019.2787048
CTTGTGA55350.019.1396275
CGTGTGC36000.018.7930585
GGCATCC39400.018.7909096
CGACCAG24700.018.2159214
GACGTTA42150.018.196511
GCGATCC38050.018.15644
CTATCGG33350.018.142532
GACTCTC58200.018.1321181
TCGTCGA30500.018.106436
CTGGACG17400.018.0871331
GAGTAAT52750.018.0580410
AGCGATC38900.018.0144423
CCGCTAG34450.018.00798410
GCCGATG41050.017.9871461
GAAGCGA42750.017.9668621
CGGGCAC29650.017.9574834
Produced by FastQC (version 0.11.5)