FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200591
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12047943
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG43800.020.2160367
CGGAGAT44250.019.886419
TTGTGAG64450.019.5111226
TCGGAGA45500.019.388358
CGTGTGC42700.019.0651935
GCTCGAC31050.018.885336
GCGATCC42450.018.788744
CTGGACG18150.018.7321531
CTTGTGA65150.018.7264085
GGCATCC48400.018.684676
CGGTGGA22150.018.6755356
GGGTAAG38900.018.5521143
CTCGAGG31000.018.5274071
TGCGTCT34350.018.4155142
CGGGCAC36250.018.3605084
AGCGATC44750.018.2410583
CCGCTAG40100.018.21414410
TTGCGTC43200.018.0834141
CGATCCA44900.018.0575375
GACTCTC69450.018.045021
Produced by FastQC (version 0.11.5)