FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12155241
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG41750.020.1021887
TTGTGAG61750.019.5792036
CGGAGAT42800.019.506399
TCGGAGA43300.019.3064658
CGTGTGC40200.019.210325
CTTGTGA61950.018.7164235
GCTCGAC31350.018.6684536
GGTGCCG19100.018.4861727
GACTCTC64100.018.4543651
CCGCTAG39300.018.41679410
CGGGCAC35900.018.3856324
GAGTAAT58950.018.230210
GGGTAAG38100.018.1904183
GCGATCC42200.018.1694624
CCGGGTA33500.018.033341
GGCATCC47400.018.0101626
CACCGCT41600.018.0065658
AGCGATC44000.018.0014293
GGGATCG17000.017.922969
GGCAGCT32350.017.9213456
Produced by FastQC (version 0.11.5)