FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12039620
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGAGAT39550.019.9137949
CTCGGAG40500.019.8540827
TTGTGAG64850.019.709786
CGTGTGC42050.019.3312745
TCGGAGA41850.018.8455738
GCTCGAC30600.018.7284556
CTTGTGA68600.018.7284035
GGGTAAG37000.018.61023
GAGTAAT63900.018.47082510
CGGTGGA22600.018.4466046
CCGCTAG42850.018.32883310
GCGATCC42100.018.2893374
GGTGCCG18850.018.2650327
CACCGCT44100.018.2582078
CTGGACG20200.018.2485681
CTCGAGG29800.018.240891
AGCGATC43250.018.1843743
GACTCTC64550.018.1376381
TGCGTCT33150.017.8849322
ACCGCTA43950.017.870099
Produced by FastQC (version 0.11.5)