FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13998299
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG47700.020.0624287
CGGAGAT47950.019.6368779
TCGGAGA48950.019.2132438
TTGTGAG74350.018.954526
CGTGTGC48950.018.9001925
GACTCTC74450.018.8596921
CGGTGGA25350.018.6610096
GCTCGAC34000.018.6051676
CTTGTGA75800.018.5329515
GAGTAAT68650.018.5227110
GGCATCC56550.018.4619796
CCGCTAG44950.018.35349710
GCGATCC49200.018.2898924
GGTGCCG24000.018.2870757
GGGTAAG44900.018.130573
AGCGATC51150.018.0659033
CACCGCT47300.018.0230318
CTCGAGG35050.017.9579451
CCGGGTA40650.017.8120521
TGCGTCT40350.017.8032932
Produced by FastQC (version 0.11.5)