FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13848495
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG48000.020.097477
CGGAGAT48700.019.7182459
TTGTGAG77600.019.6039456
TCGGAGA50100.019.1891928
CGGTGGA24500.018.5873416
GGCATCC53800.018.5850896
GACTCTC75700.018.5349641
CTTGTGA80250.018.531545
CGTGTGC47200.018.503695
CCGCTAG46750.018.49370410
GAGTAAT73700.018.49212510
GGGTAAG43900.018.2156663
TCGTCGA42100.018.2109956
GGTGCCG20950.018.1666587
ACCGCTA47800.018.0874619
CTCGAGG35650.018.0581721
TGCGTCT42950.018.0550842
TTGCGTC53800.017.9388581
GCTCGAC34400.017.9065766
GCCGATG54800.017.8725661
Produced by FastQC (version 0.11.5)