FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200607

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200607
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9554068
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG32750.020.1164847
TTGTGAG53850.019.6555446
CGGAGAT33050.019.6343779
TCGGAGA33450.019.3995868
CTTGTGA55050.019.1271535
GCTCGAC23150.018.6782976
GAGTAAT51000.018.6335710
CGTGTGC31800.018.5106815
GGCATCC36150.018.4746466
GACTCTC53150.018.4253851
CCGGGTA27300.018.3794291
AGGTCGC29000.018.3250356
GACAATC37800.018.2504563
CACCGCT34050.018.2502128
AGCGATC34300.018.1560043
TCGTCGA30550.018.1516066
GGTGCCG15300.018.1153077
GGGTAAG30950.017.9882073
CCGCTAG33400.017.98037110
TGCGTCT27750.017.9223082
Produced by FastQC (version 0.11.5)