FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9572706
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG30950.020.4711367
TTGTGAG52700.019.6615666
CGGAGAT32050.019.6312569
TCGGAGA32900.019.1240658
CGGTGGA15400.018.9279256
GCTCGAC26800.018.8799516
GACTCTC50800.018.8651081
CTTGTGA54900.018.7334215
GAGTAAT50000.018.67755710
GGGTAAG29350.018.6262783
CTCGAGG22600.018.3542981
TCGTCGA30050.018.3388066
CGTGTGC34750.018.327435
GGCATCC36750.018.257886
TGCGTCT25400.018.188262
GACGAGC13500.018.1698429
CCGCTAG32200.018.07110
TCTCGGA42150.018.0065026
TTGCGTC32850.017.9528871
GGTGCCG16500.017.9328147
Produced by FastQC (version 0.11.5)