FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10819036
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG35650.020.1154847
TTGTGAG55200.019.6731136
CGGAGAT35950.019.5804889
TCGGAGA36650.019.2065078
GGGTAAG35150.018.8124853
CGTGTGC39350.018.7058015
CCGCTAG38100.018.6490210
CTTGTGA57300.018.4912665
GCTCGAC28000.018.4686366
GCGATCC38200.018.433664
CTATCGG34300.018.3497872
GGCATCC42500.018.2513566
AGCGATC39750.018.2408583
CACCGCT40000.018.230398
GACTCTC57550.018.1642481
GACGAGC15750.018.1566289
CGGGCAC29200.018.0487734
TCGTCGA31250.018.0266466
TGCTCTA47750.018.0189045
GAGTAAT54300.018.00737410
Produced by FastQC (version 0.11.5)