FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12454730
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG42250.020.0710647
TTGTGAG67750.019.6333336
CGGAGAT43300.019.4573469
TCGGAGA44200.019.1109248
CGTGTGC41900.018.9845925
GCTCGAC33550.018.9545026
CTTGTGA69350.018.89485
GAGTAAT64650.018.59566910
GGGTAAG38650.018.5884193
GGCATCC50350.018.4206586
CCGGGTA35200.018.2240451
CCGCTAG39850.018.1065510
CGGTGGA23750.018.0666666
TCGTCGA37750.018.0114466
TGCGTCT36900.018.0102922
GCCGATG47850.017.9822351
CTCGAGG29450.017.9712661
GCGATCC45700.017.9597244
GACTCTC67900.017.9065281
AGCGATC46150.017.9038733
Produced by FastQC (version 0.11.5)