FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9053319
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG31750.020.0940257
CGGAGAT32100.019.7722389
TTGTGAG48800.019.7679866
TCGGAGA33100.019.174898
CGTGTGC31600.018.7622245
CCGCTAG29700.018.62930110
CTTGTGA51100.018.5338175
GACTCTC49300.018.5223221
GCGATCC29150.018.4523034
TGCGTCT26300.018.4445422
GAGTAAT47050.018.35249310
AGGTCGC26100.018.332916
AGCGATC29700.018.2585333
GGTGCCG13500.018.251437
GGTGGAG10850.018.2484267
GCTCGAC25850.018.2123456
GGCATCC34450.018.199876
TCGTCGA27950.018.1820496
GCCGATG33800.018.1302051
GACAATC35750.018.1223583
Produced by FastQC (version 0.11.5)