FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200651

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200651
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8882379
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGAGAT31700.020.056219
CTCGGAG31950.019.8988277
TTGTGAG47900.019.496426
CTTGTGA47800.019.031055
TCGGAGA33450.019.0066078
CGTGTGC31400.018.8468065
GAGTAAT44200.018.66472810
GCTCGAC21950.018.4916026
GAATGCT41550.018.2934072
CTGGACG15800.018.2453251
GGCATCC35800.018.2202516
GACTCTC48700.018.2101461
ATCGGTA26800.018.1826234
CGGTGGA16100.018.1734946
CGATCCA32300.018.1173325
CTCGAGG21150.018.1040731
CTATCGG28900.018.0793722
GGTGGAG10550.018.0369917
CGGGCAC25800.018.0346724
CCGCTAG29550.017.9792810
Produced by FastQC (version 0.11.5)