FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10000091
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG34900.020.2341167
CGGAGAT34950.019.8906449
CGGTGGA17950.019.4882136
TTGTGAG57050.019.4363296
CGTGTGC32600.019.0651515
TCGGAGA36700.019.0019348
GCTCGAC26400.018.6257156
GCGATCC33600.018.5959534
GAGTAAT54300.018.57593310
GGCATCC41300.018.5648776
CTTGTGA59850.018.4718885
CCGCTAG36400.018.46379510
AGCGATC35000.018.2607943
GGAGTGC20000.018.2607025
GACTCTC55900.018.223711
CCGGGTA29400.018.2229731
GCGTGTG30750.018.1730584
CTATCGG32850.018.1499522
GACAATC39250.018.1052443
CGGGCAC32400.018.0963754
Produced by FastQC (version 0.11.5)