FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10203662
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGAGAT35600.019.9910439
CTCGGAG36100.019.7748097
TTGTGAG54100.019.3152856
TCGGAGA37000.019.264268
CGTGTGC35400.018.767595
CTTGTGA55400.018.7032015
GGGTAAG34550.018.5605583
GACTCTC54950.018.538541
GCTCGAC26850.018.516936
CCGGGTA30450.018.4614521
GAGTAAT51000.018.33284810
GCGTGTG31700.018.3208334
GGCATCC40850.018.2562876
GGTGCCG17300.018.1842217
CTATCGG31650.018.1413442
CCGCTAG34100.018.06403710
CGGTGGA20200.017.9695576
GCGATCC34550.017.9238324
TGCGTCT29600.017.9113372
GTTGAAC33500.017.8971541
Produced by FastQC (version 0.11.5)