FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10214612
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG36500.019.950017
CGGAGAT37250.019.4597439
TTGTGAG55050.019.3222566
TCGGAGA37950.019.1008038
CGTGTGC36100.019.0441445
GGGTAAG34050.018.511023
GACTCTC58750.018.4857081
CTCGAGG26250.018.4437921
CTTGTGA57200.018.4229035
CCGCTAG36250.018.38852310
GGCATCC38600.018.3236646
GGTGCCG17550.018.3013747
GCTCGAC27900.018.2937376
CTGGACG17700.018.276831
CCGGGTA29400.018.2267191
CCAAGAC33400.018.1136045
CACCGCT37550.018.103258
GGAACCC22250.018.0505181
GAGTAAT51900.018.03617510
GAATGCT49350.018.0324292
Produced by FastQC (version 0.11.5)