FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8754458
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG31600.019.8412157
CGGAGAT31400.019.7924399
TTGTGAG47650.019.2292616
GCTCGAC24250.019.1417316
TCGGAGA32550.019.1269598
CGTGTGC29350.018.8887375
TTGCGTC32100.018.6150341
ACCGCTA28150.018.5998349
CTTGTGA49350.018.5445655
GGCATCC33450.018.4479146
GAGTAAT44900.018.44714510
CCGCTAG28500.018.37141610
GACTCTC48900.018.2957731
AGGTCGC25700.018.1901516
AGCGATC31850.018.0623913
CTATCGG30400.018.0556222
CACCGCT29250.018.0507768
GACGAGC12250.018.0484719
GGGTAAG26150.018.0454863
CTCGAGG21900.017.989041
Produced by FastQC (version 0.11.5)