FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8766085
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG31600.020.0152267
CGGAGAT31850.019.7545139
TCGGAGA32400.019.4191748
TTGTGAG47350.019.3278316
CGTGTGC29900.019.2402295
CTTGTGA48650.018.8565835
CCGCTAG28150.018.75610210
GAGTAAT44550.018.71549210
CGGTGGA15950.018.4822066
GCTCGAC23700.018.4720236
GACTCTC49550.018.4570621
GGGTAAG29600.018.431883
CTCGAGG21150.018.316291
AGGTCGC25700.018.2757196
AGCGATC31300.018.203933
CCGGGTA26650.018.170241
TAACAAG34100.018.128499
TGCGTCT25350.018.0942382
GCGATCC30950.018.054394
GCCGATG33650.018.053411
Produced by FastQC (version 0.11.5)