FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8543044
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG30500.019.8355857
TTGTGAG49000.019.6199326
CGGAGAT30650.019.5590699
TCGGAGA31250.019.1835378
CTTGTGA48850.018.8470365
CGTGTGC28000.018.6209775
CCGCTAG28950.018.61785710
GAGTAAT45450.018.53860510
CGGTGGA15950.018.4823116
CTGGACG15250.018.3999981
CACCGCT30100.018.3085278
ACCGCTA29450.018.3017649
GGTGGCG8900.018.2916937
GACTCTC46350.018.2805121
GGTGCCG13900.018.2801327
GCCGATG33350.018.2793751
GCGATCC29700.018.2588184
GCTCGAC21550.018.1712556
AGCGATC30700.018.094133
GGGTAAG28700.018.0519353
Produced by FastQC (version 0.11.5)