FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8557634
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG28300.020.2503037
TTGTGAG47700.019.9239566
CGGAGAT28550.019.726239
TCGGAGA28600.019.6532848
AGCGATC29300.018.921073
GAGTAAT46000.018.84293710
CTTGTGA50450.018.8379145
GGCATCC34550.018.4336266
CGTGTGC29500.018.4198115
GCTCGAC22800.018.3810526
CCGCTAG29350.018.36403810
GGGTAAG27850.018.247343
GACTCTC45450.018.2330631
CTATCGG28000.018.228582
CCGGGTA24950.018.172941
ACCGCTA29700.018.1476279
TAACAAG34300.018.1190159
TCGTCGA27300.018.0910576
GACAATC34750.018.0110993
CTGGACG15600.017.9892921
Produced by FastQC (version 0.11.5)