FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200699

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200699
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11429924
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG39100.019.9453057
TTGTGAG59400.019.6492396
CGGAGAT39500.019.4648599
TCGGAGA40700.018.8909578
CGTGTGC39500.018.7708265
GCTCGAC29050.018.7067186
CCGCTAG39850.018.5210410
CTATCGG37700.018.4707642
CGGTGGA21000.018.3867346
CTTGTGA62450.018.3374465
GAGTAAT56900.018.32598310
GGCATCC46350.018.3224836
CTGGACG18950.018.2922971
GGTGCCG18500.018.1936937
GACTCTC62400.018.1114311
GGGTAAG33500.018.0608633
GACGAGC15450.018.0120539
GCCGATG45500.017.994031
TCTCGGA51450.017.981566
ACCGCTA41100.017.9577489
Produced by FastQC (version 0.11.5)