FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11413270
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG38100.019.9784897
TTGTGAG61700.019.4857226
CGGAGAT38900.019.3696829
CCGCTAG39150.018.9650310
TCGGAGA39900.018.8842288
GAGTAAT57000.018.83460410
GCTCGAC27950.018.6936176
GGTGCCG18900.018.6238617
GCGATCC39150.018.5435854
CTTGTGA63100.018.4955625
CTCGAGG25250.018.3921471
CGGTGGA21850.018.3244726
CGTGTGC39950.018.2273165
GACTCTC60900.018.1786671
ACCGCTA40950.018.1582649
GGAGTGC22200.018.1346685
GGTGACC22750.018.1314017
GGGTAAG37350.018.0532423
GACGTTA49500.018.0522841
AGCGATC41650.018.038113
Produced by FastQC (version 0.11.5)