FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8926793
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG30150.019.9178527
CGGAGAT29900.019.8276759
TTGTGAG47850.019.15326
CTTGTGA47950.018.8838065
CCGGGTA25200.018.733661
TCGGAGA31750.018.637518
GGCATCC34750.018.4583156
GACTCTC48050.018.4131681
CGTGTGC29100.018.4125635
CGGGCAC26750.018.384934
CCGCTAG30850.018.32627910
TCGTCGA26550.018.191916
GGGTAAG29950.018.184293
CGGTGGA17150.018.0910286
GCGATCC31150.018.083824
GAGTAAT45500.018.0824210
TTGCGTC32900.018.0284651
GCCGATG35800.017.9820331
CACCGCT32400.017.8562438
TAACAAG37200.017.8290659
Produced by FastQC (version 0.11.5)