FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10084782
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG32900.020.4591987
TTGTGAG49600.019.609446
CGGAGAT34750.019.2437829
TCGGAGA34750.019.2121328
GCTCGAC23000.018.9914136
CGGTGGA19000.018.8781136
CTTGTGA52000.018.788935
GGCATCC42700.018.4492936
CTCGAGG25150.018.4210381
GGGTAAG33500.018.2938443
CGTGTGC34650.018.2581635
AGCGATC38150.018.2270813
GAATGCT49750.018.2014352
TCGTCGA33550.018.1681986
GCGATCC37600.018.1132014
GACTCTC53900.018.0890161
TAACAAG40500.018.0867659
GAAGCGA40900.018.0269181
AGGTCGC30500.018.0009446
AGCCGGA14200.017.969728
Produced by FastQC (version 0.11.5)