FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10143098
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG34950.020.0465437
CGGAGAT35400.019.5744179
TCGGAGA35550.019.4918218
TTGTGAG52350.019.3357876
GCTCGAC27700.018.9067946
CGGTGGA17900.018.7472486
CGTGTGC34850.018.7215865
CTTGTGA53900.018.4735575
GGGTAAG32950.018.3985083
GCGATCC34950.018.3845124
GCCGATG40850.018.3471181
GAGTAAT49900.018.2950410
GACTCTC55700.018.1977311
CCGGGTA29500.018.1685281
CGGGCAC29450.018.1567214
CCGCTAG34800.018.14213810
AGGTCGC31850.018.135966
ACCGCTA35150.018.086489
CTCGAGG24250.017.9719921
GGCATCC39900.017.951426
Produced by FastQC (version 0.11.5)