FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10063973
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG34650.019.9677567
CGGAGAT34800.019.8183759
TTGTGAG50100.019.6509936
TCGGAGA35250.019.503068
CGTGTGC35650.018.9147285
GACTCTC52700.018.625631
CTTGTGA53050.018.516775
CCGGGTA29500.018.46461
GCTCGAC27900.018.4518876
CGACCAG25100.018.4504764
CGGGCAC27750.018.3534284
GGGTAAG34050.018.2851473
GAGTAAT49150.018.26182710
CCGCTAG32350.018.25902610
CTGGACG17100.018.2115551
TTGCGTC35900.018.176781
CACCGCT33550.018.1306958
GGCATCC40200.018.059976
AGCGATC34300.018.0556643
TAACAAG39500.017.9893389
Produced by FastQC (version 0.11.5)