FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11727805
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG37650.020.1283747
CGGAGAT38850.019.450119
TTGTGAG65700.019.35886
TCGGAGA39850.018.9620258
GAGTAAT61700.018.75409710
CTTGTGA67400.018.6911165
GGCATCC48300.018.6789596
CGTGTGC40100.018.5203465
GGGTAAG38350.018.447093
CCGGGTA33500.018.3637871
GACTCTC61600.018.2942471
GTTGAAC38850.018.1577591
AGCGATC41950.018.1491533
GCGATCC41800.018.0829094
AGGTCGC35750.018.0654166
GCCGATG48850.017.9326211
GCTCGAC31150.017.8722176
CTATCGG36300.017.8523962
TGCTCTA54150.017.8396245
CGCGATG22200.017.83672510
Produced by FastQC (version 0.11.5)