FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005200756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46957238
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA825750.1758514842802296No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG717640.15282840954146407No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG587250.12506059236277908No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)