EGAF00005201095 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005201095
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	47298481
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA	189036	0.39966611189902695	No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG	155379	0.32850737849276807	No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGT	123386	0.26086672846851044	No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTTCTCCTGAGCGTGAAGCCG	92605	0.1957885285998931	No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAG	89877	0.19002090151690074	No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC	87587	0.18517930840104568	No Hit
GTCCAAGTGGCATAGGGGAGCTTAGGGCTCTGCCCCATGATGTACAGTCCC	81778	0.1728977300560667	No Hit
ATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA	78842	0.16669034255032417	No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG	70184	0.14838531495334914	No Hit
GATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCA	68801	0.14546133098862096	No Hit
TCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAA	62512	0.13216492089883394	No Hit
TTCAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGT	57244	0.12102714249956568	No Hit
TTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAA	54843	0.1159508695427238	No Hit
GGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAG	51645	0.1091895530429402	No Hit
GAAGTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAG	51626	0.10914938261970823	No Hit
CGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTG	49518	0.10469257987375957	No Hit
GGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGC	47859	0.10118506765576679	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGAGGT	36800	14.393076	3
GGTCACT	35485	14.282801	7
AGGGATC	35055	14.151005	2
GTCACTC	36110	13.973328	8
AGGTCAC	37180	13.825317	6
CAGGGAT	38055	13.435721	1
GAGGTCA	39005	13.363306	5
GGAGGTC	40885	12.870458	4
ACTCTCC	39075	12.86751	11
TCACTCT	40290	12.690847	9
GTACAGT	33450	12.408979	42
TACAGTC	33245	12.397885	43
TGGGAGG	29680	12.328556	2
TAGCGTA	785	12.321583	37
CACTCTC	41395	12.088342	10
GGGATCA	42705	11.838638	3
TATCCTA	9200	11.820681	5
TCAGACG	13510	11.650499	2
ACAGTCC	36040	11.511267	44
CTGGGAG	34920	11.450497	1