EGAF00005201168 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005201168
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	48357859
Sequences flagged as poor quality	0
Sequence length	51
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT	442432	0.914912299984166	No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	117466	0.2429098442923207	No Hit
GCCAGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG	106860	0.22097752508025634	No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACG	105613	0.21839883357946016	No Hit
CCACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAAC	68614	0.14188800211357577	No Hit
CTCCTTTTCTATCTGAGCTCTTCCTCCTCCACATCACAGCAGCGACCACAG	67597	0.13978493133866823	No Hit
CCCAGACCAAAGCCAATGCCGGCTCCACCACCGAAACCAAATCCACTCCCG	57959	0.11985435500773513	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAACGAT	75770	29.128763	45
AGAACGA	93035	23.786058	44
AGACCGC	96000	23.247772	4
CAGACCG	96805	23.10558	3
GACCGCG	96875	22.923616	5
ACCGCGT	98335	22.617582	6
TCAGACC	102180	22.153076	2
CCGCGTT	102660	21.666687	7
CTCAGAC	109290	21.496721	1
CGCGTTC	104010	21.379063	8
AAGAACG	104645	21.109972	43
GCGTTCT	106180	20.920952	9
AATACGG	109470	20.19064	32
ATACGGA	109890	20.065056	33
TACGGAG	109420	20.043726	34
TCGTATA	4455	20.000896	2
CGTATAG	4390	19.935446	3
CAATACG	111645	19.89626	31
TTCACGC	36090	19.629759	7
AACGCTA	35085	19.247242	23