FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005201232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005201232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44701781
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGACCGC109300.019.8038334
CAGACCG112700.019.3661673
GACCGCG113350.019.1954965
ACCGCGT121200.017.970916
CCGTACG44400.017.7876474
GAACGAT123750.017.54096445
CGTACGC45750.016.9676765
CCGCGTT128950.016.8725437
CGCGTTC131850.016.5004588
CTCCGTT64000.015.5154031
TACGCCA53300.014.9856847
AGAACGA146000.014.9473544
CGCCGCG50800.014.83655928
CTCCGGT63500.014.8220061
GTCCGTT36000.014.7609381
CTCCGAT47600.014.3804031
TTCGGCG54450.014.37893344
CCCGTAT35950.014.1551341
TACGGAG156400.014.06844134
GCGTTCT155850.014.0460999
Produced by FastQC (version 0.11.5)