FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005201520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005201520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43332276
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT1597080.36856591608527556No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG940490.21704144965752548No Hit
CTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCGGTGCTCTACACG440590.10167709630576524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)