FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005201602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005201602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44952401
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCGACG33500.024.514586
AGACCGC101150.020.130534
CAGACCG106200.019.2792193
TCGGCGC94850.019.00059545
CGGTATA52350.018.95369720
TTCGGCG95950.018.9469144
AACGCTA140100.018.82196223
ACGCTAC142000.018.61765324
CGCGTTC111050.018.3968588
CGACGAG42050.018.2458788
CCGCGTT111300.018.2342647
ACCGCGT112850.018.0037356
CGTACGC102950.017.833515
GACCGCG114600.017.6697715
TCGACGA46600.017.6231617
CGCTACC132550.017.31403525
CCGTACG107300.017.131484
AAAACGC159300.016.75100921
TCACGCT166650.016.6199288
TACGCCA112650.016.4378687
Produced by FastQC (version 0.11.5)