EGAF00005201660 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005201660
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44990078
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCAGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG	333438	0.7411367457509187	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT	77950	0.17326042422064705	No Hit
CTGGGCTCTTCCCTGTTCACTCGCCGTTACTGAGGGAATCCTGGTTAGTTT	75611	0.16806150013787483	No Hit
CTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCGGTGCTCTACACG	74565	0.16573654306622895	No Hit
GCCAGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTATC	73201	0.16270476348140583	No Hit
CCCAGCTTCATCTTCAACGTTGTGGAAAGGGACTGTACATCATGGGGCAGA	51128	0.11364283476014422	No Hit
GGCGGACTTTGGAGTGGGAAGCGGGGAATGTCTACGTGCGTATGCACGTGG	48947	0.10879509922165505	No Hit
CTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTG	46500	0.10335612220987926	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTCACGC	74380	29.496305	7
TCACGCT	75315	29.106226	8
ACGCTCA	80300	27.433798	10
CACGCTC	81020	27.048388	9
GCCAGCT	82670	25.07476	1
GCTTCAC	90050	25.015581	5
CGCTCAG	91315	24.16644	11
TTCGACG	2450	24.05832	6
AACGCTA	91360	23.90796	23
ACGCTAC	91850	23.76822	24
AAAACGC	93015	23.510607	21
GAAAACG	92960	23.457365	20
CGCTACC	93500	23.31113	25
AAACGCT	94225	23.214294	22
AGAAAAC	103105	21.349657	19
CTTCACG	105710	21.286333	6
CTACCTC	103705	21.16427	27
AGACCGC	18620	21.011158	4
GTTTTCG	85090	20.977135	45
TACCTCT	104745	20.934843	28