EGAF00005201959 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005201959
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44123698
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCT	69452	0.15740294478490902	No Hit
CTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCC	57645	0.13064408155454243	No Hit
GGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGAC	51976	0.11779611038041282	No Hit
CAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGG	49667	0.11256309477958987	No Hit
CCTGAGGTCACATGCGTGGTGGTGGACGTGAGCCACGAAGACCCTGAGGTC	47078	0.10669549954765804	No Hit
GCCTGACCTGCCTGGTCAAAGGCTTCTATCCCAGCGACATCGCCGTGGAGT	45635	0.10342514809162187	No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG	45592	0.10332769479113016	No Hit
GGCTTCTATCCCAGCGACATCGCCGTGGAGTGGGAGAGCAATGGGCAGCCG	44381	0.10058313788658421	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCAGGA	22435	17.039577	1
ATAGGGG	16835	13.418326	38
GGGAGGT	22770	13.3797245	3
GTTGTCG	2010	13.320855	26
GGAGGTC	22775	13.218717	4
GGCATAG	17075	13.098042	35
AGCTTAG	17135	13.052473	45
GAGCTTA	18010	12.343259	44
TGGCATA	18610	12.090223	34
CATAGGG	20470	11.101502	37
ACACAGC	41900	10.863319	7
GCATAGG	21030	10.784549	36
CGTCAGT	9665	10.755527	1
TAACGCC	13105	10.5932045	40
ATAACGC	13125	10.491337	39
GGACACA	43535	10.393565	5
CGTGGCG	11055	10.380135	1
GTTCACC	13745	10.378288	6
TGTGCAA	19100	10.342912	12
TCAGACG	7005	10.278586	2